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NCBI Gene

Symbol apob Gene ID 338
IF 5.8% Link Number 0
Full Name apolipoprotein B
Aliases FLDB,LDLCQ4,apoB-100,apoB-48
Summary

This gene product is the main apolipoprotein of chylomicrons and low density lipoproteins. It occurs in plasma as two main isoforms, apoB-48 and apoB-100: the former is synthesized exclusively in the gut and the latter in the liver. The intestinal and the hepatic forms of apoB are encoded by a single gene from a single, very long mRNA. The two isoforms share a common N-terminal sequence. The shorter apoB-48 protein is produced after RNA editing of the apoB-100 transcript at residue 2180 (CAA->UAA), resulting in the creation of a stop codon, and early translation termination. Mutations in this gene or its regulatory region cause hypobetalipoproteinemia, normotriglyceridemic hypobetalipoproteinemia, and hypercholesterolemia due to ligand-defective apoB, diseases affecting plasma cholesterol and apoB levels. [provided by RefSeq, Jul 2008]

Node Expression

# PMID Condition Expression Material  
1 27108396 Control VS hADSC day 14 post-adipogenic induction (1 1.19) hADSC
2 27044590 group(MSC AD14day) (0 5.33502015127881) hMSC
3 20573458 subcutaneous,intramuscular adipocytes (1 2) (2.22 0) IMF
4 26205789 hADSC adipo-dif(7 21)day (1 4.197114923) ADSC
5 23894377 control VS cold-induced Liver (1 2) (1 115.44156) mouse
6 23894377 control VS cold-induced BAT (1 2) (1 5.568254) mouse
7 15051823 2 5 Up(1 3.1)fold 3T3-L1

Relation Chart

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Relation Table (0 record)

# Source IF(%) Relation Target IF(%) Type Method PMID
Sorry, no matching records found.

Prediction Chart

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Prediction Table (9 records)

# Source IF(%) Target IF(%) Species Agreement Computational Predictions / PMID
1 hnf4a 8.6 apob 5.8 Human   1
2 hnf4a 8.6 apob 5.8 Human 100.00 1639815
3 nr2f1 3.9 apob 5.8 Human 100.00 1639815
4 nr2f6 2.9 apob 5.8 Human 100.00 1639815
5 ppara 15 apob 5.8 Human 100.00 11925428
6 ppara 15 apob 5.8 Human 100.00 16542871
7 ppara 15 apob 5.8 Human 100.00 11925428
8 ppara 15 apob 5.8 Human 100.00 16542871
9 pparg 77.1 apob 5.8 Human 100.00 16542871