Node

NCBI Gene

Symbol mirn20a Gene ID  
IF 12.1% Link Number 7
Full Name MI0000568
Aliases miR-20a,mir20a,mmu-mir-20a
Summary

The miR-17 microRNA precursor family are a group of related small non-coding RNA genes called microRNAs that regulate gene expression. The microRNA precursor miR-17 family, includes miR-20a/b, miR-93, and miR-106a/b. With the exception of miR-93, these microRNAs are produced from several microRNA gene clusters, which apparently arose from a series of ancient evolutionary genetic duplication events, and also include members of the miR-19, and miR-25 families. These clusters are transcribed as long non-coding RNA transcripts that are processed to form ~70 nucleotide microRNA precursors, that are subsequently processed by the Dicer enzyme to give a ~22 nucleotide products. The mature microRNA products are thought to regulate expression levels of other genes through complementarity to the 3' UTR of specific target messenger RNA. The paralogous miRNA gene clusters that give rise to miR-17 family microRNAs (miR-17~92, miR-106a~363, and miR-106b~25) have been implicated in a wide variety of malignancies and are sometimes referred to as oncomirs. The oncogenic potential of these non-protein encoding genes was first identified in mouse viral tumorigenesis screens. In humans, the activating mutations of miR-17~92 have been identified in non-Hodgkin's lymphoma, whereas the miRNA constituents of the clusters are overexpressed in a multiple cancer types. High level expression of miR-17 family members induces cell proliferation, whereas deletion of the miR-17~92 cluster, in mice, is lethal and causes lung and lymphoid cell developmental defects.

Node Summary

PMID: 21351149

Increases BMP signaling by targeting antagonists of the pathway

PMID: 21743293

We showed that miR-20a promoted osteogenic differentiation by the upregulation of BMP/Runx2 signaling. We performed bioinformatics analysis and predicted that PPARγ, Bambi and Crim1 would be potential targets of miR-20a.Furthermore, we confirmed that all these molecules were indeed the targets of miR-20a by luciferase reporter, quantitative RT-PCR and western blot assays.

Node Expression

# PMID Condition Expression Material  
1 27562723 C2C12 adipogenic VS med VS myogenic (1.5 1 -1.5) C2C12
2 24307698 spindle-shaped (SS) VS round-shaped (RS) hMSCs(1 2) (-1.8 1) MSC
3 23827457 hMSC osteo-differentiation (1 4)day (0 -0.68) MSC
4 24218084 Satb2-overexp Osteo-dif 7days (1 2) (1 3) MSC
5 26505482 low VS high IMF group (1 2) Up-Regulated IMF
6 26482036 Muscle VS WAT VS BAT (1 2 3) (9 9 9) brown adipocyte
7 22937097 osteo-dif (0 3 7 15)day (2 0 -1 -2) induced pluripotent stem(iPS) cell

Relation Chart

Chart Legend

Relation Table (7 records)

# Source IF(%) Relation Target IF(%) Type Method PMID
1 mirn20a 12.1 inhibits crim1 4.9 bind to RNA Reporter,RT-qPCR or RT-PCR,Western blot 21743293
2 mirn20a 12.1 inhibits kdm6b 4.7 bind to RNA   25817070
3 mirn20a 12.1 inhibits pparg 77.1 bind to RNA Reporter,RT-qPCR or RT-PCR,Western blot 21743293
4 mirn20a 12.1 inhibits tgfb1r2 0.5 bind to RNA   25817070
5 mirn20a 12.1 inhibits crim1 4.9 bind to RNA Reporter,RT-qPCR or RT-PCR,Western blot 21743293
6 mirn20a 12.1 inhibits bambi 4.9 bind to RNA Reporter,RT-qPCR or RT-PCR,Western blot 21743293
7 satb2 3.1 activates mirn20a 12.1 others Bioinformatic,Cell culture and differentiation,Microarray,Overexpression and knockdown,RT-qPCR or RT-PCR,Western blot 24218084

Prediction Chart

Chart Legend

Prediction Table (44 records)

# Source IF(%) Target IF(%) Species Agreement Computational Predictions / PMID
1 mirn20a 12.1 dusp2 4.2 Human -0.09 3
2 mirn20a 12.1 app 7.2 Human 100.00 2
3 mirn20a 12.1 bcl2 14 Human 100.00 1
4 mirn20a 12.1 bmpr2 3.1 Human 100.00 1
5 mirn20a 12.1 ccnd1 26.2 Human 100.00 2
6 mirn20a 12.1 ccnd2 13.3 Human 100.00 1
7 mirn20a 12.1 cdkn1a 16.2 Human 100.00 3
8 mirn20a 12.1 e2f3 5.4 Human 100.00 2
9 mirn20a 12.1 fas 10.3 Human 100.00 1
10 mirn20a 12.1 fgf7 4.8 Human 100.00 1
11 mirn20a 12.1 hif1a 21.7 Human 100.00 1
12 mirn20a 12.1 rb1 15.2 Human 100.00 1
13 mirn20a 12.1 rbl2 4.3 Human 100.00 1
14 mirn20a 12.1 smad4 10.4 Human 100.00 1
15 mirn20a 12.1 stat3 34.7 Human 100.00 2
16 mirn20a 12.1 tgfbr2 8.6 Human 100.00 2
17 mirn20a 12.1 vegfa 16.5 Human 100.00 1
18 mirn20a 12.1 bcl2 14 Human 100.00 1
19 mirn20a 12.1 pgk1 3.1 Human 100.00 1
20 mirn20a 12.1 rb1 15.2 Human 100.00 1
21 mirn20a 12.1 rbl1 1.7 Human 100.00 1
22 mirn20a 12.1 rbl2 4.3 Human 100.00 1
23 mirn20a 12.1 smad4 10.4 Human 100.00 1
24 mirn20a 12.1 tgfbr2 8.6 Human 153.00 2
25 mirn20a 12.1 thbs1 11.5 Human 154.00 1
26 mirn20a 12.1 tomm20 2.4 Human 244.00 1
27 mirn20a 12.1 vegfa 16.5 Human 100.00 1
28 mirn20a 12.1 wee1 6.3 Human 100.00 1
29 mirn20a 12.1 pdpn 3.1 Mouse -0.24 4
30 mirn20a 12.1 slc25a27 4.2 Mouse -0.12 3
31 mirn20a 12.1 app 7.2 Mouse 100.00 2
32 mirn20a 12.1 app 7.2 Mouse 100.00 2
33 mirn20a 12.1 ccnd1 26.2 Mouse 100.00 1
34 mirn20a 12.1 ccnd1 26.2 Mouse 100.00 1
35 mirn20a 12.1 e2f3 5.4 Mouse 100.00 1
36 mirn20a 12.1 e2f3 5.4 Mouse 100.00 1
37 mirn20a 12.1 e2f3 5.4 Mouse 100.00 1
38 mirn20a 12.1 stat3 34.7 Mouse 100.00 3
39 mirn20a 12.1 trpv6 4.7 Mouse 0.12 3
40 mirn20a 12.1 dbp 6.5 Mouse -0.06 3
41 mirn20a 12.1 prkaa1 9.5 Mouse -0.01 3
42 mirn20a 12.1 pten 14.7 Human 100.00 1
43 mirn20a 12.1 pten 14.7 Mouse 100.00 2
44 mirn20a 12.1 ddx5 0.9 Human 100.00 1