Node

NCBI Gene

Symbol cdkn2a Gene ID 1029
IF 8.6% Link Number 0
Full Name cyclin-dependent kinase inhibitor 2A
Aliases ARF,CDK4I,CDKN2,CMM2,INK4,INK4A,MLM,MTS-1,MTS1,P14,P14ARF,P16,P16-INK4A,P16INK4,P16INK4A,P19,P19ARF,TP16
Summary

This gene generates several transcript variants which differ in their first exons. At least three alternatively spliced variants encoding distinct proteins have been reported, two of which encode structurally related isoforms known to function as inhibitors of CDK4 kinase. The remaining transcript includes an alternate first exon located 20 Kb upstream of the remainder of the gene; this transcript contains an alternate open reading frame (ARF) that specifies a protein which is structurally unrelated to the products of the other variants. This ARF product functions as a stabilizer of the tumor suppressor protein p53 as it can interact with, and sequester, the E3 ubiquitin-protein ligase MDM2, a protein responsible for the degradation of p53. In spite of the structural and functional differences, the CDK inhibitor isoforms and the ARF product encoded by this gene, through the regulatory roles of CDK4 and p53 in cell cycle G1 progression, share a common functionality in cell cycle G1 control. This gene is frequently mutated or deleted in a wide variety of tumors, and is known to be an important tumor suppressor gene. [provided by RefSeq, Sep 2012]

Node Expression

# PMID Condition Expression Material  
1 27385551 human preadipocyte dif (0 384) hours (0 1.96725) preadipocyte
2 27385551 human preadipocyte dif (0 96) hours (0 1.46341) preadipocyte
3 27385551 human preadipocyte dif (0 192) hours (0 1.42912) preadipocyte
4 27385551 human preadipocyte dif (0 48) hours (0 1.33095) preadipocyte
5 27385551 human preadipocyte dif (96 192) hours (0 -1.61569) preadipocyte
6 27108396 Control VS hADSC day 21 post-adipogenic induction (1 -1.28) hADSC
7 27108396 Control VS hADSC day 14 post-adipogenic induction (1 -1.31) hADSC
8 27044590 group(MSC AD14day) (0 1.66786181682925) hMSC
9 15033539 dif(0 2 8 16 24 48 96)h dif(1 2 -10 -11 -11 -12 -13)fold 3T3-L1

Relation Chart

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Relation Table (0 record)

# Source IF(%) Relation Target IF(%) Type Method PMID
Sorry, no matching records found.

Prediction Chart

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Prediction Table (21 records)

# Source IF(%) Target IF(%) Species Agreement Computational Predictions / PMID
1 dnmt1 8.5 cdkn2a 8.6 Human 100.00 17934516
2 e2f1 22.1 cdkn2a 8.6 Human 100.00 11705881
3 ets1 11.9 cdkn2a 8.6 Human 100.00 17370299
4 ets2 6 cdkn2a 8.6 Human 100.00 17370299
5 ezh2 11.5 cdkn2a 8.6 Human 100.00 23289480
6 hdac1 11.3 cdkn2a 8.6 Human 100.00 23455154
7 hdac3 4.1 cdkn2a 8.6 Human 100.00 18558095
8 hdac4 9.2 cdkn2a 8.6 Human 100.00 18558095
9 hdac9 10.5 cdkn2a 8.6 Human 100.00 19122829
10 junb 7.2 cdkn2a 8.6 Human 100.00 17370299
11 mirn10b 10.3 cdkn2a 8.6 Human 100.00 2
12 mirn155 20.6 cdkn2a 8.6 Human 100.00 2
13 mirn296 9.3 cdkn2a 8.6 Human 100.00 1
14 mirn423 10.6 cdkn2a 8.6 Human 100.00 1
15 mta1 4.1 cdkn2a 8.6 Human 100.00 21555589
16 smarca4 4.4 cdkn2a 8.6 Human 100.00 14604992
17 smarcb1 2.9 cdkn2a 8.6 Human 100.00 14604992
18 sp1 40.7 cdkn2a 8.6 Human 100.00 21830402
19 sp3 9.8 cdkn2a 8.6 Human 100.00 17370299
20 tbx3 2.2 cdkn2a 8.6 Human 100.00 15300007
21 znf148 4.1 cdkn2a 8.6 Human 100.00 20230874